the centre for plant integrative biology

a centre for integrative systems biology funded by the BBSRC and EPSRC

Hardware

Resources

  • Picture of Virtual Seed Web Resource
    Virtual Seed Web ResourceWeb-based tools for analysis of gene expression during seed maturation, dormancy and germination
  • Picture of Models
    ModelsAccess CPIB's publicly accessible models
  • Picture of DRIVE
    DRIVEThe Data Repository for Images and Virtually Everything
  • Picture of Localisome Tools
    Localisome ToolsInformation about CPIB generated localisation resources

Software

  • Picture of RooTrak
    RooTrakA tool for analysing X-ray micro CT scans of roots in soil
  • Picture of CellSeT
    CellSeTA tool to segment confocal microscope images
  • Picture of Cell-O-Tape
    Cell-O-TapeFiji macro for measuring cells. Coming soon.
  • Picture of RootTrace
    RootTraceA tool for automatic, high throughput determination of root length and other measures
  • Picture of Infobiotics Workbench
    Infobiotics WorkbenchInfobiotics is a computational framework for systems and synthetic biology
  • Picture of Equipment Software
    Equipment SoftwareSoftware for equipment control and data acquisition developed at CPIB
  • Picture of PSC Colocalization Plugin
    PSC Colocalization PluginA colocalization plugin for ImageJ which calculates correlation coefficients over areas of interest
Posted by Susie Lydon |